Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine protease do | SAMN04488511_102171 | Not Available | Positive | 830372 - 832048 | 61877.8 |
| carbohydrate binding module (family 6) | SAMN04488511_102172 | Not Available | Positive | 832332 - 833717 | 51475.5 |
| alpha-l-fucosidase 2 | SAMN04488511_102173 | Not Available | Positive | 833790 - 836255 | 91726.9 |
| nad(p)h-quinone oxidoreductase subunit 5 | SAMN04488511_102174 | Not Available | Positive | 837033 - 838499 | 53890.9 |
| hypothetical protein | SAMN04488511_102175 | Not Available | Positive | 838502 - 840850 | 88668.4 |
| hypothetical protein | SAMN04488511_102176 | Not Available | Positive | 840870 - 841703 | 31175.5 |
| dna-binding transcriptional regulator, lysr family | SAMN04488511_102177 | Not Available | Negative | 841805 - 842746 | 35359.4 |
| isocitrate dehydrogenase | SAMN04488511_102178 | Not Available | Positive | 842835 - 844271 | 52318.1 |
| hypothetical protein | SAMN04488511_102179 | Not Available | Positive | 844465 - 844737 | 10297.3 |
| hypothetical protein | SAMN04488511_102180 | Not Available | Negative | 844948 - 846021 | 39646.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
