Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-xylosidase | SAMN04488511_102161 | Not Available | Negative | 815100 - 816716 | 61181.1 |
| alpha-l-fucosidase | SAMN04488511_102162 | Not Available | Negative | 816856 - 818463 | 60887.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488511_102163 | Not Available | Positive | 819039 - 819614 | 22769.5 |
| fecr family protein | SAMN04488511_102164 | Not Available | Positive | 819682 - 820815 | 41739.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_102165 | Not Available | Positive | 820984 - 824289 | 123214.0 |
| susd family protein | SAMN04488511_102166 | Not Available | Positive | 824299 - 825708 | 53001.9 |
| protein of unknown function | SAMN04488511_102167 | Not Available | Positive | 825713 - 826420 | 26385.2 |
| pkd-like family protein | SAMN04488511_102168 | Not Available | Positive | 826424 - 827845 | 52289.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488511_102169 | Not Available | Positive | 827873 - 829273 | 53809.4 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488511_102170 | Not Available | Positive | 829287 - 830375 | 40225.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
