Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN04488511_102111 | Not Available | Negative | 747292 - 747762 | 18040.3 |
| iron (metal) dependent repressor, dtxr family | SAMN04488511_102112 | Not Available | Positive | 747887 - 748549 | 25063.0 |
| manganese transport protein | SAMN04488511_102113 | Not Available | Positive | 748536 - 750401 | 68325.9 |
| ahpc/tsa family protein | SAMN04488511_102114 | Not Available | Negative | 750467 - 750946 | 18281.7 |
| ssra-binding protein | SAMN04488511_102115 | Not Available | Positive | 751779 - 752228 | 17543.5 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN04488511_102116 | Not Available | Negative | 752391 - 753047 | 24502.8 |
| replication restart dna helicase pria | SAMN04488511_102117 | Not Available | Negative | 753307 - 755787 | 94014.8 |
| uncharacterized membrane protein ygdd, tmem256/duf423 family | SAMN04488511_102118 | Not Available | Negative | 755787 - 756173 | 14318.8 |
| hypothetical protein | SAMN04488511_102119 | Not Available | Positive | 756264 - 757832 | 60123.9 |
| hypothetical protein | SAMN04488511_102120 | Not Available | Positive | 757862 - 759274 | 53388.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
