Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04488511_102101 | Not Available | Negative | 733567 - 734436 | 33732.7 |
| mfs transporter, fhs family, l-fucose permease | SAMN04488511_102102 | Not Available | Positive | 734794 - 736104 | 47967.8 |
| altronate hydrolase | SAMN04488511_102103 | Not Available | Positive | 736112 - 737749 | 59588.5 |
| l-fucose dehydrogenase | SAMN04488511_102104 | Not Available | Positive | 737937 - 738719 | 28292.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488511_102105 | Not Available | Negative | 738861 - 740267 | 51186.8 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488511_102106 | Not Available | Negative | 740254 - 743448 | 115510.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488511_102107 | Not Available | Negative | 743473 - 744675 | 42766.4 |
| transcriptional regulator, tetr family | SAMN04488511_102108 | Not Available | Negative | 744749 - 745354 | 23201.2 |
| ribosomal protein s18 acetylase rimi | SAMN04488511_102109 | Not Available | Positive | 745535 - 745990 | 17654.2 |
| putative nadh-flavin reductase | SAMN04488511_102110 | Not Available | Negative | 746259 - 746900 | 23728.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
