Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase is200 like | SAMN04488511_10221 | Not Available | Positive | 656086 - 656634 | 22011.5 |
| penicillin-binding protein 1c | SAMN04488511_10222 | Not Available | Positive | 656723 - 659095 | 88797.1 |
| hypothetical protein | SAMN04488511_10223 | Not Available | Negative | 659318 - 659473 | 5565.91 |
| uncharacterized membrane protein yhhn | SAMN04488511_10224 | Not Available | Negative | 660500 - 661192 | 26668.7 |
| hypothetical protein | SAMN04488511_10225 | Not Available | Positive | 661639 - 661989 | 12640.7 |
| t/g mismatch-specific endonuclease | SAMN04488511_10226 | Not Available | Negative | 661990 - 662490 | 19816.8 |
| pap2 superfamily protein | SAMN04488511_10227 | Not Available | Positive | 662937 - 663563 | 23804.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488511_10228 | Not Available | Negative | 663567 - 664187 | 23979.5 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04488511_10229 | Not Available | Positive | 664389 - 665054 | 24668.5 |
| aldose 1-epimerase | SAMN04488511_10230 | Not Available | Negative | 665125 - 666429 | 48044.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
