Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucuronidase | SAMN04488511_10211 | Not Available | Negative | 638810 - 640639 | 70147.2 |
| transcriptional regulator, laci family | SAMN04488511_10212 | Not Available | Positive | 640892 - 641911 | 38259.1 |
| predicted arabinose efflux permease, mfs family | SAMN04488511_10213 | Not Available | Negative | 642063 - 643292 | 44683.6 |
| dna-binding transcriptional regulator, marr family | SAMN04488511_10214 | Not Available | Positive | 643463 - 643906 | 16795.4 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN04488511_10215 | Not Available | Positive | 643953 - 644789 | 31343.2 |
| glutathione peroxidase | SAMN04488511_10216 | Not Available | Negative | 645327 - 645839 | 19308.4 |
| dna topoisomerase i | SAMN04488511_10217 | Not Available | Positive | 646405 - 648969 | 96258.2 |
| hypothetical protein | SAMN04488511_10218 | Not Available | Positive | 649045 - 649449 | 15015.3 |
| protein of unknown function | SAMN04488511_10219 | Not Available | Negative | 649751 - 650188 | 16228.0 |
| hypothetical protein | SAMN04488511_10220 | Not Available | Positive | 650401 - 655992 | 207507.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
