Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, yigz family | SAMN04488511_10128 | Not Available | Positive | 34374 - 34988 | 23174.0 |
| uridine phosphorylase | SAMN04488511_10129 | Not Available | Positive | 35122 - 35982 | 31611.2 |
| uncharacterized conserved protein ybcv, duf1398 family | SAMN04488511_10130 | Not Available | Negative | 36553 - 36948 | 14589.0 |
| aldose 1-epimerase | SAMN04488511_10131 | Not Available | Negative | 36952 - 38001 | 38704.0 |
| galactokinase | SAMN04488511_10132 | Not Available | Positive | 38078 - 39229 | 42301.4 |
| spou rrna methylase family protein | SAMN04488511_10133 | Not Available | Positive | 39326 - 39856 | 19812.9 |
| ompa-ompf porin, oop family | SAMN04488511_10134 | Not Available | Positive | 40237 - 41580 | 48488.1 |
| atp-dependent rna helicase rhle | SAMN04488511_10135 | Not Available | Negative | 41720 - 43018 | 48695.9 |
| hypothetical protein | SAMN04488511_10136 | Not Available | Positive | 43335 - 43496 | 6347.56 |
| muramoyltetrapeptide carboxypeptidase | SAMN04488511_10138 | Not Available | Positive | 44166 - 45182 | 37501.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
