Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN04488511_13113 | Not Available | Positive | 5733235 - 5734365 | 43007.7 |
| hypothetical protein | SAMN04488511_13114 | Not Available | Positive | 5734735 - 5735112 | 13915.3 |
| hypothetical protein | SAMN04488511_13115 | Not Available | Positive | 5735258 - 5735419 | 6319.11 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04488511_13116 | Not Available | Positive | 5735581 - 5736549 | 38159.3 |
| pas domain s-box-containing protein | SAMN04488511_1321 | Not Available | Negative | 5737062 - 5741450 | 165890.0 |
| sugar transferase | SAMN04488511_1322 | Not Available | Negative | 5741696 - 5742895 | 45382.2 |
| response regulator receiver domain-containing protein | SAMN04488511_1323 | Not Available | Negative | 5742895 - 5743299 | 15219.5 |
| pas domain s-box-containing protein | SAMN04488511_1324 | Not Available | Positive | 5743716 - 5746004 | 85141.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN04488511_1325 | Not Available | Negative | 5746503 - 5748431 | 70258.5 |
| condensin subunit scpa | SAMN04488511_1326 | Not Available | Positive | 5748635 - 5749378 | 28747.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
