Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted purr-regulated permease perm | SAMN04488511_101473 | Not Available | Negative | 571194 - 572318 | 41619.2 |
| trna modification gtpase trme | SAMN04488511_101474 | Not Available | Positive | 572555 - 573913 | 49379.5 |
| hypothetical protein | SAMN04488511_101475 | Not Available | Negative | 574111 - 574278 | 6540.39 |
| hypothetical protein | SAMN04488511_101476 | Not Available | Negative | 574259 - 574645 | 15197.5 |
| hypothetical protein | SAMN04488511_101477 | Not Available | Negative | 574850 - 575566 | 27232.0 |
| uncharacterized membrane protein yhah, duf805 family | SAMN04488511_101478 | Not Available | Negative | 575651 - 576034 | 14852.9 |
| uncharacterized conserved protein, duf2252 family | SAMN04488511_101479 | Not Available | Positive | 576310 - 577554 | 47377.1 |
| hypothetical protein | SAMN04488511_101480 | Not Available | Positive | 577748 - 577987 | 8537.9 |
| astacin (peptidase family m12a) | SAMN04488511_101481 | Not Available | Negative | 578274 - 579104 | 30013.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04488511_101482 | Not Available | Positive | 579738 - 581300 | 58566.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
