Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein recf | SAMN04488511_12922 | Not Available | Negative | 5692269 - 5693372 | 42655.4 |
| hypothetical protein | SAMN04488511_12923 | Not Available | Positive | 5693478 - 5693885 | 15431.3 |
| tetratricopeptide repeat-containing protein | SAMN04488511_12924 | Not Available | Positive | 5694009 - 5694674 | 24371.0 |
| hypothetical protein | SAMN04488511_12926 | Not Available | Positive | 5695136 - 5695261 | 4550.45 |
| transposase | SAMN04488511_12927 | Not Available | Positive | 5695624 - 5696040 | 15572.8 |
| transposase is116/is110/is902 family protein | SAMN04488511_12928 | Not Available | Positive | 5696037 - 5696630 | 22226.2 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488511_1301 | Not Available | Positive | 5697127 - 5698554 | 49636.7 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488511_1302 | Not Available | Positive | 5698559 - 5699428 | 31795.1 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN04488511_1303 | Not Available | Positive | 5700161 - 5702713 | 94893.6 |
| glutathione synthetase, atp-grasp domain | SAMN04488511_1304 | Not Available | Negative | 5702797 - 5703669 | 33696.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
