Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488511_12724 | Not Available | Positive | 5637809 - 5638540 | 26444.4 |
| protein of unknown function | SAMN04488511_12725 | Not Available | Positive | 5638598 - 5639299 | 25740.0 |
| membrane-associated protein | SAMN04488511_12726 | Not Available | Positive | 5639366 - 5640052 | 25640.2 |
| hypothetical protein | SAMN04488511_12727 | Not Available | Negative | 5640053 - 5641009 | 36762.9 |
| hypothetical protein | SAMN04488511_12728 | Not Available | Negative | 5641145 - 5641705 | 21615.0 |
| very-short-patch-repair endonuclease | SAMN04488511_12729 | Not Available | Negative | 5641877 - 5642236 | 14252.9 |
| hypothetical protein | SAMN04488511_1281 | Not Available | Negative | 5643387 - 5644997 | 61708.6 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04488511_1282 | Not Available | Negative | 5644999 - 5646939 | 72868.3 |
| nucleotidyl transferase | SAMN04488511_1283 | Not Available | Negative | 5647068 - 5647976 | 33867.2 |
| putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN04488511_1284 | Not Available | Negative | 5649443 - 5650831 | 53463.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
