Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homogentisate 1,2-dioxygenase | SAMN04488511_1273 | Not Available | Negative | 5617582 - 5618742 | 44506.8 |
| fumarylacetoacetate (faa) hydrolase | SAMN04488511_1274 | Not Available | Positive | 5619098 - 5620096 | 37045.6 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04488511_1275 | Not Available | Positive | 5620272 - 5621159 | 32656.5 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN04488511_1276 | Not Available | Positive | 5621183 - 5621788 | 23272.1 |
| nlpc/p60 family protein | SAMN04488511_1277 | Not Available | Negative | 5621789 - 5622334 | 19940.2 |
| uncharacterized membrane protein | SAMN04488511_1278 | Not Available | Negative | 5622450 - 5622824 | 14039.4 |
| short-chain dehydrogenase | SAMN04488511_1279 | Not Available | Negative | 5622871 - 5623572 | 25092.6 |
| phenylalanine-4-hydroxylase | SAMN04488511_12710 | Not Available | Negative | 5623758 - 5625539 | 66740.6 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN04488511_12712 | Not Available | Negative | 5626239 - 5626748 | 19733.5 |
| hypothetical protein | SAMN04488511_12713 | Not Available | Negative | 5626828 - 5627517 | 26501.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
