Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488511_12539 | Not Available | Positive | 5570213 - 5571115 | 33027.7 |
| hypothetical protein | SAMN04488511_12540 | Not Available | Positive | 5571157 - 5572356 | 45564.7 |
| protein of unknown function | SAMN04488511_12541 | Not Available | Negative | 5572751 - 5573962 | 46182.2 |
| protein of unknown function | SAMN04488511_12542 | Not Available | Negative | 5573976 - 5574203 | 7938.59 |
| thiamine biosynthesis lipoprotein | SAMN04488511_12543 | Not Available | Negative | 5574349 - 5575281 | 33817.8 |
| thioredoxin-like | SAMN04488511_12544 | Not Available | Negative | 5575292 - 5575720 | 16438.8 |
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN04488511_12545 | Not Available | Negative | 5576003 - 5576626 | 22483.6 |
| ni,fe-hydrogenase i cytochrome b subunit | SAMN04488511_12546 | Not Available | Negative | 5576734 - 5577396 | 24759.8 |
| signal transduction histidine kinase | SAMN04488511_12547 | Not Available | Negative | 5577403 - 5578656 | 48511.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488511_12548 | Not Available | Negative | 5578653 - 5579330 | 25562.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
