Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl prolyl cis-trans isomerase /apo-metallochaperone slyd | SAMN04488511_12348 | Not Available | Negative | 5469255 - 5469761 | 18065.0 |
| hypothetical protein | SAMN04488511_12349 | Not Available | Negative | 5469772 - 5471781 | 75897.6 |
| protein of unknown function | SAMN04488511_12350 | Not Available | Positive | 5471909 - 5472316 | 15719.8 |
| l-alanine-dl-glutamate epimerase | SAMN04488511_12351 | Not Available | Positive | 5472313 - 5473410 | 40863.1 |
| lysozyme | SAMN04488511_12352 | Not Available | Negative | 5474145 - 5475041 | 34803.4 |
| alpha-amylase | SAMN04488511_1241 | Not Available | Negative | 5475929 - 5477416 | 56759.2 |
| acyl-coa hydrolase | SAMN04488511_1242 | Not Available | Positive | 5478570 - 5479091 | 19333.4 |
| sodium/proton antiporter, cpa1 family | SAMN04488511_1243 | Not Available | Positive | 5479162 - 5480352 | 43772.0 |
| hypothetical protein | SAMN04488511_1244 | Not Available | Negative | 5480342 - 5480926 | 21270.8 |
| predicted rna-binding protein, contains pua-like domain | SAMN04488511_1245 | Not Available | Negative | 5481144 - 5481548 | 15435.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
