Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent fmn reductase | SAMN04488511_12328 | Not Available | Positive | 5444918 - 5445475 | 20287.6 |
| opacity protein | SAMN04488511_12329 | Not Available | Positive | 5445790 - 5446392 | 21224.3 |
| metallo-peptidase family m12b reprolysin-like | SAMN04488511_12330 | Not Available | Negative | 5446693 - 5448468 | 66336.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488511_12331 | Not Available | Negative | 5448627 - 5451452 | 103064.0 |
| dual-action heigh metallo-peptidase | SAMN04488511_12332 | Not Available | Positive | 5451575 - 5452411 | 29523.6 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488511_12333 | Not Available | Negative | 5453268 - 5455775 | 95442.7 |
| polysaccharide deacetylase | SAMN04488511_12334 | Not Available | Positive | 5455913 - 5456833 | 34796.0 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN04488511_12335 | Not Available | Positive | 5456846 - 5457724 | 33131.6 |
| protein of unknown function | SAMN04488511_12336 | Not Available | Positive | 5457814 - 5458983 | 44202.8 |
| transcription elongation factor, grea/greb family | SAMN04488511_12337 | Not Available | Negative | 5459140 - 5459592 | 16807.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
