Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase, alpha chain | SAMN04488511_12249 | Not Available | Positive | 5405425 - 5406192 | 28311.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488511_12250 | Not Available | Negative | 5406326 - 5407015 | 26004.8 |
| uracil-dna glycosylase | SAMN04488511_12251 | Not Available | Negative | 5407015 - 5407695 | 25453.3 |
| thioredoxin | SAMN04488511_12252 | Not Available | Negative | 5407903 - 5408382 | 17865.8 |
| hypothetical protein | SAMN04488511_12253 | Not Available | Positive | 5408535 - 5409074 | 20613.0 |
| hypothetical protein | SAMN04488511_12254 | Not Available | Negative | 5409168 - 5409317 | 5662.84 |
| general stress protein 26 | SAMN04488511_12255 | Not Available | Positive | 5409463 - 5410017 | 20372.9 |
| hypothetical protein | SAMN04488511_12256 | Not Available | Negative | 5410168 - 5410380 | 8276.78 |
| lysyl-trna synthetase, class ii | SAMN04488511_12257 | Not Available | Negative | 5410517 - 5412226 | 64884.9 |
| tigr02453 family protein | SAMN04488511_12258 | Not Available | Positive | 5412567 - 5413256 | 26584.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
