Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnogalacturonyl hydrolase yesr | SAMN04488511_12219 | Not Available | Positive | 5367155 - 5368282 | 43952.2 |
| hypothetical protein | SAMN04488511_12220 | Not Available | Positive | 5368298 - 5369545 | 47576.2 |
| glycosyl hydrolases family 43 | SAMN04488511_12221 | Not Available | Positive | 5369623 - 5370741 | 41383.2 |
| beta-galactosidase | SAMN04488511_12222 | Not Available | Positive | 5370853 - 5372688 | 69040.9 |
| ompa-ompf porin, oop family | SAMN04488511_12223 | Not Available | Negative | 5373041 - 5373571 | 19512.3 |
| glucose 1-dehydrogenase | SAMN04488511_12224 | Not Available | Positive | 5373751 - 5374521 | 28145.8 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN04488511_12225 | Not Available | Negative | 5374523 - 5376334 | 69636.6 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488511_12226 | Not Available | Negative | 5376425 - 5377123 | 26765.6 |
| udpglucose--hexose-1-phosphate uridylyltransferase | SAMN04488511_12227 | Not Available | Positive | 5377283 - 5378344 | 40674.2 |
| galactokinase | SAMN04488511_12228 | Not Available | Positive | 5378356 - 5379507 | 42551.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
