Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN04488511_12159 | Not Available | Positive | 5320569 - 5321168 | 23219.5 |
| putative mrna 3-end processing factor | SAMN04488511_12160 | Not Available | Negative | 5321486 - 5322427 | 35855.1 |
| dephospho-coa kinase | SAMN04488511_12161 | Not Available | Negative | 5322472 - 5323089 | 22514.3 |
| hypothetical protein | SAMN04488511_12162 | Not Available | Negative | 5323089 - 5324036 | 36065.1 |
| preprotein translocase subunit yajc | SAMN04488511_12163 | Not Available | Negative | 5324158 - 5324475 | 11449.4 |
| protein of unknown function | SAMN04488511_12164 | Not Available | Negative | 5324541 - 5324999 | 16153.5 |
| nusb antitermination factor | SAMN04488511_12165 | Not Available | Negative | 5325002 - 5325952 | 36861.7 |
| leucine dehydrogenase | SAMN04488511_12166 | Not Available | Negative | 5326002 - 5327090 | 39231.2 |
| atp-binding cassette, subfamily b | SAMN04488511_12167 | Not Available | Positive | 5327767 - 5329557 | 67726.8 |
| protein of unknown function | SAMN04488511_12168 | Not Available | Positive | 5329637 - 5329960 | 12779.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
