Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | SAMN04488511_12139 | Not Available | Positive | 5301568 - 5302428 | 31549.7 |
| putative endonuclease | SAMN04488511_12140 | Not Available | Negative | 5302593 - 5302889 | 11510.7 |
| predicted n-acyltransferase, gnat family | SAMN04488511_12141 | Not Available | Negative | 5302974 - 5303396 | 16056.0 |
| low affinity fe/cu permease | SAMN04488511_12142 | Not Available | Negative | 5303371 - 5303883 | 18895.7 |
| fructose-bisphosphate aldolase | SAMN04488511_12143 | Not Available | Negative | 5304013 - 5305092 | 39789.2 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN04488511_12144 | Not Available | Positive | 5305451 - 5306296 | 31243.1 |
| peptidase family m28 | SAMN04488511_12145 | Not Available | Positive | 5306757 - 5308304 | 56676.4 |
| peptidase family s41 | SAMN04488511_12146 | Not Available | Positive | 5308425 - 5309639 | 46545.6 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | SAMN04488511_12147 | Not Available | Negative | 5309764 - 5310873 | 41598.1 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN04488511_12148 | Not Available | Negative | 5310836 - 5312170 | 49327.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
