Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase iscs | SAMN04488511_120118 | Not Available | Positive | 5253066 - 5254277 | 44105.9 |
| nitrogen fixation protein nifu | SAMN04488511_120119 | Not Available | Positive | 5254391 - 5254804 | 14802.6 |
| iron-sulfur cluster assembly protein | SAMN04488511_120120 | Not Available | Positive | 5254901 - 5255227 | 11901.9 |
| hypothetical protein | SAMN04488511_120121 | Not Available | Negative | 5255288 - 5255501 | 8194.04 |
| predicted arabinose efflux permease, mfs family | SAMN04488511_1211 | Not Available | Positive | 5257515 - 5258741 | 45436.8 |
| glycosyl hydrolases family 43 | SAMN04488511_1212 | Not Available | Negative | 5258795 - 5259775 | 37213.1 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN04488511_1213 | Not Available | Negative | 5260630 - 5262072 | 53443.7 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488511_1214 | Not Available | Positive | 5262181 - 5263260 | 40246.2 |
| hypothetical protein | SAMN04488511_1215 | Not Available | Positive | 5263315 - 5263869 | 21242.4 |
| putative membrane protein | SAMN04488511_1216 | Not Available | Positive | 5263862 - 5265367 | 57426.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
