Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | SAMN04488511_120108 | Not Available | Negative | 5245700 - 5247052 | 50553.8 |
| ribosomal protein l11 methyltransferase | SAMN04488511_120109 | Not Available | Negative | 5247231 - 5248079 | 31998.7 |
| triosephosphate isomerase | SAMN04488511_120110 | Not Available | Negative | 5248080 - 5248841 | 27503.7 |
| uncharacterized membrane protein yckc, rdd family | SAMN04488511_120111 | Not Available | Negative | 5248861 - 5249313 | 17045.9 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | SAMN04488511_120112 | Not Available | Negative | 5249316 - 5250482 | 42880.9 |
| large subunit ribosomal protein l31 | SAMN04488511_120113 | Not Available | Negative | 5250555 - 5250803 | 9711.64 |
| hypothetical protein | SAMN04488511_120114 | Not Available | Positive | 5251091 - 5251258 | 6291.76 |
| hypothetical protein | SAMN04488511_120115 | Not Available | Positive | 5251267 - 5251965 | 26618.4 |
| hypothetical protein | SAMN04488511_120116 | Not Available | Negative | 5251962 - 5252246 | 10765.9 |
| methylmalonyl-coa epimerase | SAMN04488511_120117 | Not Available | Negative | 5252541 - 5252948 | 15210.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
