Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | SAMN04488511_12058 | Not Available | Negative | 5188439 - 5189371 | 34939.4 |
| aspartate aminotransferase | SAMN04488511_12059 | Not Available | Positive | 5189539 - 5190735 | 43769.1 |
| hypothetical protein | SAMN04488511_12060 | Not Available | Positive | 5191027 - 5191740 | 27620.3 |
| hypothetical protein | SAMN04488511_12061 | Not Available | Positive | 5191740 - 5192000 | 9534.48 |
| peptide/nickel transport system atp-binding protein | SAMN04488511_12062 | Not Available | Positive | 5192000 - 5193706 | 63349.9 |
| predicted neuraminidase (sialidase) | SAMN04488511_12063 | Not Available | Positive | 5193710 - 5194744 | 38822.3 |
| ribonuclease r | SAMN04488511_12064 | Not Available | Positive | 5194877 - 5197009 | 80955.8 |
| geranylgeranyl diphosphate synthase, type ii | SAMN04488511_12065 | Not Available | Positive | 5197039 - 5198028 | 36668.1 |
| hypothetical protein | SAMN04488511_12066 | Not Available | Negative | 5198231 - 5199079 | 30510.5 |
| large subunit ribosomal protein l27 | SAMN04488511_12067 | Not Available | Negative | 5199402 - 5199812 | 14219.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
