Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488511_12038 | Not Available | Negative | 5171536 - 5171988 | 17364.5 |
| dna topoisomerase-3 | SAMN04488511_12039 | Not Available | Positive | 5172191 - 5174044 | 69283.2 |
| dna helicase, putative | SAMN04488511_12040 | Not Available | Negative | 5174046 - 5175953 | 71330.0 |
| protein of unknown function | SAMN04488511_12041 | Not Available | Negative | 5176054 - 5176437 | 14646.7 |
| hypothetical protein | SAMN04488511_12042 | Not Available | Negative | 5176415 - 5177206 | 30054.9 |
| hypothetical protein | SAMN04488511_12043 | Not Available | Negative | 5177573 - 5177761 | 6869.13 |
| hypothetical protein | SAMN04488511_12044 | Not Available | Positive | 5177874 - 5178254 | 15364.0 |
| ktsc domain-containing protein | SAMN04488511_12045 | Not Available | Positive | 5178299 - 5178502 | 7959.72 |
| endonuclease-8 | SAMN04488511_12046 | Not Available | Positive | 5178504 - 5179241 | 28852.3 |
| isopentenyl-diphosphate delta-isomerase | SAMN04488511_12047 | Not Available | Negative | 5179444 - 5179986 | 20755.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
