Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | SAMN04488511_12028 | Not Available | Negative | 5158702 - 5160165 | 53987.5 |
| predicted amidohydrolase | SAMN04488511_12029 | Not Available | Positive | 5160382 - 5161890 | 57692.2 |
| hypothetical protein | SAMN04488511_12030 | Not Available | Negative | 5161970 - 5162221 | 9349.3 |
| epoxyqueuosine reductase | SAMN04488511_12031 | Not Available | Positive | 5162314 - 5163249 | 35662.4 |
| hypothetical protein | SAMN04488511_12032 | Not Available | Negative | 5163436 - 5165295 | 70162.9 |
| dna polymerase-3 subunit epsilon | SAMN04488511_12033 | Not Available | Negative | 5165383 - 5166336 | 36205.4 |
| transglutaminase-like superfamily protein | SAMN04488511_12034 | Not Available | Positive | 5166522 - 5168495 | 75036.4 |
| transglutaminase-like superfamily protein | SAMN04488511_12035 | Not Available | Positive | 5168497 - 5170404 | 72312.1 |
| hypothetical protein | SAMN04488511_12036 | Not Available | Negative | 5170388 - 5170510 | 4690.87 |
| l,d-transpeptidase catalytic domain | SAMN04488511_12037 | Not Available | Positive | 5170754 - 5171539 | 29141.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
