Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mj0570-related uncharacterized domain-containing protein | SAMN04488511_12017 | Not Available | Negative | 5146869 - 5147591 | 27493.9 |
| nad-dependent deacetylase | SAMN04488511_12018 | Not Available | Negative | 5147584 - 5148300 | 26886.4 |
| iron complex transport system substrate-binding protein | SAMN04488511_12019 | Not Available | Negative | 5148275 - 5149216 | 34958.4 |
| hypothetical protein | SAMN04488511_12020 | Not Available | Negative | 5149343 - 5149933 | 22283.9 |
| vitamin b12 transporter | SAMN04488511_12021 | Not Available | Negative | 5149972 - 5151822 | 67614.8 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN04488511_12023 | Not Available | Positive | 5152404 - 5153807 | 52015.4 |
| chloride channel protein, cic family | SAMN04488511_12024 | Not Available | Negative | 5153976 - 5155766 | 65907.6 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN04488511_12025 | Not Available | Negative | 5155843 - 5156565 | 27530.3 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN04488511_12026 | Not Available | Negative | 5156797 - 5157525 | 27629.7 |
| peroxiredoxin | SAMN04488511_12027 | Not Available | Negative | 5157590 - 5158702 | 41432.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
