Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoin utilization deacetylase acuc | SAMN04488511_1207 | Not Available | Negative | 5139124 - 5140026 | 33659.5 |
| putative membrane protein | SAMN04488511_1208 | Not Available | Negative | 5140026 - 5140886 | 32725.9 |
| kynureninase | SAMN04488511_1209 | Not Available | Negative | 5140899 - 5142188 | 48644.2 |
| general stress protein 26 | SAMN04488511_12010 | Not Available | Negative | 5142252 - 5142740 | 18387.8 |
| dna-3-methyladenine glycosylase | SAMN04488511_12011 | Not Available | Negative | 5142795 - 5143400 | 22410.0 |
| gaf domain-containing protein | SAMN04488511_12012 | Not Available | Negative | 5143414 - 5143893 | 17518.0 |
| spheroidene monooxygenase | SAMN04488511_12013 | Not Available | Positive | 5144022 - 5144711 | 26373.8 |
| hypothetical protein | SAMN04488511_12014 | Not Available | Positive | 5144728 - 5144979 | 9671.54 |
| stress responsive a/b barrel domain | SAMN04488511_12015 | Not Available | Negative | 5145806 - 5146144 | 12915.3 |
| ymgg-like gly-zipper | SAMN04488511_12016 | Not Available | Negative | 5146244 - 5146753 | 17531.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
