Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer | SAMN04488511_11992 | Not Available | Negative | 5097819 - 5099840 | 76103.1 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN04488511_11993 | Not Available | Negative | 5099851 - 5101098 | 47873.9 |
| mobilisation protein (mobc) | SAMN04488511_11994 | Not Available | Negative | 5101083 - 5101550 | 18136.1 |
| atp-dependent dna helicase recg | SAMN04488511_11995 | Not Available | Positive | 5101872 - 5103677 | 69099.5 |
| hypothetical protein | SAMN04488511_11996 | Not Available | Negative | 5103691 - 5103957 | 10259.6 |
| helix-turn-helix domain-containing protein | SAMN04488511_11997 | Not Available | Negative | 5103994 - 5104266 | 10514.8 |
| hypothetical protein | SAMN04488511_11998 | Not Available | Positive | 5104432 - 5104620 | 7196.87 |
| Trna-arg | Not Available | Not Available | Positive | 5106122 - 5106198 | Not Available |
| hypothetical protein | SAMN04488511_119100 | Not Available | Positive | 5106534 - 5106782 | 9340.13 |
| bacteriocin-type signal sequence-containing protein | SAMN04488511_119101 | Not Available | Negative | 5107023 - 5107217 | 7276.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
