Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN04488511_11754 | Not Available | Positive | 4713472 - 4714239 | 28903.9 |
| polyisoprenoid-binding protein ycei | SAMN04488511_11755 | Not Available | Negative | 4714779 - 4715363 | 20235.4 |
| glycine dehydrogenase | SAMN04488511_11757 | Not Available | Negative | 4715998 - 4718874 | 104882.0 |
| transcriptional regulator, padr family | SAMN04488511_11759 | Not Available | Positive | 4719336 - 4719674 | 13153.9 |
| uncharacterized membrane protein | SAMN04488511_11760 | Not Available | Positive | 4719671 - 4720261 | 22555.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488511_11761 | Not Available | Positive | 4720266 - 4721588 | 49144.7 |
| hypothetical protein | SAMN04488511_11762 | Not Available | Negative | 4721638 - 4722201 | 21200.7 |
| threonine/homoserine efflux transporter rhta | SAMN04488511_11763 | Not Available | Negative | 4722415 - 4723305 | 32023.8 |
| pyridoxine 5'-phosphate synthase | SAMN04488511_11764 | Not Available | Negative | 4723432 - 4724148 | 26528.6 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04488511_11765 | Not Available | Positive | 4724232 - 4725872 | 62597.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
