Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN04488511_11734 | Not Available | Negative | 4693784 - 4695196 | 53290.8 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN04488511_11735 | Not Available | Positive | 4695706 - 4696164 | 16971.4 |
| peptidase family m28 | SAMN04488511_11736 | Not Available | Positive | 4696207 - 4697913 | 63614.1 |
| fic/doc family protein | SAMN04488511_11737 | Not Available | Negative | 4697915 - 4698907 | 38269.8 |
| phytoene desaturase | SAMN04488511_11738 | Not Available | Positive | 4698947 - 4700431 | 56120.2 |
| shikimate kinase | SAMN04488511_11739 | Not Available | Negative | 4700547 - 4701050 | 18980.9 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488511_11740 | Not Available | Negative | 4701070 - 4701516 | 17680.2 |
| peptide/nickel transport system permease protein | SAMN04488511_11741 | Not Available | Negative | 4701522 - 4702577 | 38983.4 |
| doxx protein | SAMN04488511_11742 | Not Available | Negative | 4702580 - 4703731 | 43425.6 |
| protein of unknown function | SAMN04488511_11743 | Not Available | Negative | 4703760 - 4704311 | 21087.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
