Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rep element-mobilizing transposase rayt | SAMN04488511_116139 | Not Available | Negative | 4654787 - 4655341 | 21536.7 |
| protein of unknown function | SAMN04488511_116140 | Not Available | Negative | 4655568 - 4658609 | 114434.0 |
| protein of unknown function | SAMN04488511_116141 | Not Available | Negative | 4658824 - 4661850 | 114514.0 |
| Trna-gln | Not Available | Not Available | Positive | 4662076 - 4662149 | Not Available |
| ribose-phosphate pyrophosphokinase | SAMN04488511_116143 | Not Available | Positive | 4662219 - 4663160 | 33977.2 |
| large subunit ribosomal protein l25 | SAMN04488511_116144 | Not Available | Positive | 4663247 - 4663831 | 21492.3 |
| peptidyl-trna hydrolase, pth1 family | SAMN04488511_116145 | Not Available | Positive | 4664032 - 4664592 | 20506.1 |
| hypothetical protein | SAMN04488511_1171 | Not Available | Positive | 4665758 - 4666723 | 36135.0 |
| lipid a 3-o-deacylase (pagl) | SAMN04488511_1172 | Not Available | Positive | 4666723 - 4667835 | 41482.4 |
| hypothetical protein | SAMN04488511_1173 | Not Available | Negative | 4667832 - 4668191 | 13332.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
