Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gxxexxy protein | SAMN04488511_11696 | Not Available | Positive | 4607806 - 4608183 | 14229.8 |
| sprt-like family protein | SAMN04488511_11697 | Not Available | Positive | 4608230 - 4608838 | 23921.9 |
| uncharacterized conserved protein, duf433 family | SAMN04488511_11698 | Not Available | Positive | 4608884 - 4609120 | 8940.83 |
| predicted nuclease, contains pin domain, potential toxin-antitoxin system component | SAMN04488511_11699 | Not Available | Positive | 4609121 - 4609468 | 13508.4 |
| adenine deaminase | SAMN04488511_116100 | Not Available | Negative | 4609469 - 4611106 | 59756.0 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN04488511_116101 | Not Available | Negative | 4611203 - 4613179 | 73506.3 |
| l-lactate dehydrogenase complex protein lldf | SAMN04488511_116102 | Not Available | Negative | 4613210 - 4614595 | 52040.6 |
| peptidase family m28 | SAMN04488511_116103 | Not Available | Negative | 4614747 - 4616381 | 60127.5 |
| ribose 5-phosphate isomerase b | SAMN04488511_116104 | Not Available | Negative | 4616407 - 4616844 | 15937.8 |
| sec-independent protein translocase protein tatc | SAMN04488511_116105 | Not Available | Negative | 4616890 - 4617771 | 33091.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
