Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rele toxin of rele / relb toxin-antitoxin system | SAMN04488511_11685 | Not Available | Positive | 4593272 - 4593604 | 12303.3 |
| aspartate aminotransferase | SAMN04488511_11686 | Not Available | Positive | 4593638 - 4594891 | 45254.3 |
| hypothetical protein | SAMN04488511_11687 | Not Available | Positive | 4594962 - 4595813 | 31908.5 |
| pp_03882 | SAMN04488511_11688 | Not Available | Negative | 4596182 - 4597606 | Not Available |
| hypothetical protein | SAMN04488511_11689 | Not Available | Negative | 4597617 - 4598456 | 32712.8 |
| spfh domain / band 7 family protein | SAMN04488511_11690 | Not Available | Negative | 4598517 - 4599614 | 41592.8 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04488511_11691 | Not Available | Positive | 4600637 - 4601677 | 40541.1 |
| levanase | SAMN04488511_11692 | Not Available | Positive | 4601748 - 4603265 | 56924.9 |
| bacterial peptide chain release factor 3 (brf-3) | SAMN04488511_11693 | Not Available | Negative | 4603440 - 4605023 | 60172.6 |
| helix-turn-helix domain-containing protein | SAMN04488511_11695 | Not Available | Positive | 4605472 - 4607742 | 86380.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
