Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase is200 like | SAMN04488511_115152 | Not Available | Negative | 4484840 - 4485388 | 21951.5 |
| hypothetical protein | SAMN04488511_115153 | Not Available | Negative | 4485572 - 4485763 | 7449.21 |
| hypothetical protein | SAMN04488511_115154 | Not Available | Negative | 4485862 - 4487946 | 77438.2 |
| l,d-transpeptidase catalytic domain | SAMN04488511_115155 | Not Available | Positive | 4488238 - 4488930 | 26283.4 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN04488511_115156 | Not Available | Negative | 4489011 - 4489754 | 26380.8 |
| putative endonuclease | SAMN04488511_115157 | Not Available | Negative | 4489800 - 4490099 | 12142.4 |
| transposase, is4 family | SAMN04488511_1161 | Not Available | Negative | 4490413 - 4491939 | 58139.6 |
| Trna-ser | Not Available | Not Available | Positive | 4492355 - 4492441 | Not Available |
| hypothetical protein | SAMN04488511_1163 | Not Available | Negative | 4493923 - 4494108 | 6796.06 |
| hypothetical protein | SAMN04488511_1164 | Not Available | Negative | 4494196 - 4494618 | 15816.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
