Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase subunit 3 | SAMN04488511_115131 | Not Available | Positive | 4464592 - 4465179 | 21532.0 |
| choline dehydrogenase | SAMN04488511_115132 | Not Available | Positive | 4465198 - 4466898 | 64342.3 |
| predicted dehydrogenase | SAMN04488511_115133 | Not Available | Positive | 4466983 - 4468140 | 42218.6 |
| sugar phosphate isomerase/epimerase | SAMN04488511_115134 | Not Available | Positive | 4468150 - 4469202 | 39545.5 |
| cytochrome c | SAMN04488511_115135 | Not Available | Positive | 4469231 - 4469617 | 13885.3 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488511_115136 | Not Available | Positive | 4469650 - 4471107 | 54276.6 |
| protein of unknown function | SAMN04488511_115137 | Not Available | Positive | 4471160 - 4471840 | 25303.2 |
| nucleoside transporter | SAMN04488511_115138 | Not Available | Positive | 4472095 - 4473333 | 45284.3 |
| hydroxypyruvate isomerase | SAMN04488511_115139 | Not Available | Positive | 4473335 - 4474225 | 33033.7 |
| sugar phosphate isomerase/epimerase | SAMN04488511_115140 | Not Available | Positive | 4474234 - 4475109 | 32356.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
