Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488511_11599 | Not Available | Positive | 4425817 - 4426377 | 21970.3 |
| hypothetical protein | SAMN04488511_115100 | Not Available | Positive | 4426393 - 4427070 | 25420.7 |
| hypothetical protein | SAMN04488511_115101 | Not Available | Positive | 4427078 - 4427518 | 17355.2 |
| acetylornithine/succinyldiaminopimelate/ putresci ne aminotransferase | SAMN04488511_115102 | Not Available | Positive | 4427587 - 4428777 | 43515.0 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488511_115103 | Not Available | Positive | 4428836 - 4429513 | 25978.1 |
| signal transduction histidine kinase | SAMN04488511_115104 | Not Available | Positive | 4429622 - 4430932 | 50200.6 |
| hypothetical protein | SAMN04488511_115105 | Not Available | Positive | 4431078 - 4431551 | 16960.3 |
| ribosomal large subunit pseudouridine synthase d | SAMN04488511_115106 | Not Available | Negative | 4431724 - 4432410 | 26075.5 |
| ketopantoate hydroxymethyltransferase | SAMN04488511_115107 | Not Available | Negative | 4432567 - 4433382 | 29612.9 |
| carbamoyl-phosphate synthase small subunit | SAMN04488511_115108 | Not Available | Positive | 4433689 - 4434801 | 40947.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
