Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488511_11589 | Not Available | Positive | 4416690 - 4417004 | 12388.0 |
| rep element-mobilizing transposase rayt | SAMN04488511_11590 | Not Available | Positive | 4417244 - 4417759 | 20661.9 |
| hypothetical protein | SAMN04488511_11591 | Not Available | Negative | 4417859 - 4418011 | 5408.94 |
| kup system potassium uptake protein | SAMN04488511_11592 | Not Available | Negative | 4418015 - 4419973 | 73511.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488511_11593 | Not Available | Positive | 4420153 - 4420683 | 19426.0 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN04488511_11594 | Not Available | Positive | 4420757 - 4421368 | 23080.7 |
| peptidase family m23 | SAMN04488511_11595 | Not Available | Positive | 4421372 - 4423105 | 64027.0 |
| peroxiredoxin q/bcp | SAMN04488511_11596 | Not Available | Positive | 4423228 - 4423692 | 17194.3 |
| transketolase | SAMN04488511_11597 | Not Available | Positive | 4423750 - 4424595 | 30609.4 |
| transketolase | SAMN04488511_11598 | Not Available | Positive | 4424783 - 4425739 | 34427.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
