Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c peroxidase | SAMN04488511_11569 | Not Available | Positive | 4395192 - 4396331 | 42751.4 |
| glutamate racemase | SAMN04488511_11570 | Not Available | Negative | 4396572 - 4397387 | 30485.5 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04488511_11571 | Not Available | Negative | 4397825 - 4398403 | 20537.6 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04488511_11572 | Not Available | Negative | 4398468 - 4398998 | 20447.5 |
| beta-barrel assembly machine subunit bama | SAMN04488511_11573 | Not Available | Negative | 4399101 - 4401644 | 95416.5 |
| undecaprenyl diphosphate synthase | SAMN04488511_11574 | Not Available | Negative | 4401794 - 4402534 | 28265.8 |
| hypothetical protein | SAMN04488511_11575 | Not Available | Negative | 4402554 - 4403366 | 30479.0 |
| nad+ kinase | SAMN04488511_11576 | Not Available | Negative | 4403369 - 4404250 | 32812.5 |
| cbs domain-containing protein | SAMN04488511_11577 | Not Available | Negative | 4404260 - 4404922 | 24525.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488511_11578 | Not Available | Negative | 4404923 - 4405687 | 29059.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
