Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN04488511_11558 | Not Available | Negative | 4379925 - 4381091 | 44227.3 |
| hypothetical protein | SAMN04488511_11559 | Not Available | Negative | 4381119 - 4382330 | 45780.2 |
| gmp synthase (glutamine-hydrolysing) | SAMN04488511_11560 | Not Available | Negative | 4382450 - 4383979 | 56467.7 |
| dcmp deaminase | SAMN04488511_11561 | Not Available | Negative | 4384252 - 4384710 | 16410.6 |
| mfs transporter, fhs family, l-fucose permease | SAMN04488511_11562 | Not Available | Negative | 4384775 - 4386211 | 51374.6 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04488511_11563 | Not Available | Positive | 4386355 - 4386981 | 23138.2 |
| amidophosphoribosyltransferase | SAMN04488511_11565 | Not Available | Negative | 4387356 - 4389257 | 72449.6 |
| tonb-dependent receptor plug domain | SAMN04488511_11566 | Not Available | Positive | 4389479 - 4392259 | 102782.0 |
| protein of unknown function | SAMN04488511_11567 | Not Available | Positive | 4392263 - 4393594 | 48536.5 |
| hypothetical protein | SAMN04488511_11568 | Not Available | Positive | 4393630 - 4395189 | 59322.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
