Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN04488511_11518 | Not Available | Negative | 4330358 - 4331119 | 29168.1 |
| histidine kinase | SAMN04488511_11519 | Not Available | Negative | 4331116 - 4332258 | 43714.6 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488511_11520 | Not Available | Negative | 4332260 - 4333669 | 51926.0 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | SAMN04488511_11521 | Not Available | Negative | 4333675 - 4336812 | 113374.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488511_11522 | Not Available | Negative | 4336832 - 4338013 | 42324.5 |
| hypothetical protein | SAMN04488511_11523 | Not Available | Negative | 4338199 - 4338330 | 5077.42 |
| hypothetical protein | SAMN04488511_11524 | Not Available | Positive | 4338448 - 4338975 | 20024.2 |
| hypothetical protein | SAMN04488511_11525 | Not Available | Negative | 4338957 - 4339112 | 5503.71 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488511_11526 | Not Available | Negative | 4339112 - 4340203 | 41238.6 |
| hypothetical protein | SAMN04488511_11527 | Not Available | Positive | 4341020 - 4341322 | 11900.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
