Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide isomerase or thioredoxin | SAMN04488511_11475 | Not Available | Negative | 4192763 - 4193329 | 21931.0 |
| helix-turn-helix domain-containing protein | SAMN04488511_11476 | Not Available | Positive | 4193940 - 4194203 | 10010.1 |
| two component transcriptional regulator, lyttr family | SAMN04488511_11477 | Not Available | Positive | 4194315 - 4195043 | 27852.5 |
| histidine kinase | SAMN04488511_11478 | Not Available | Positive | 4195237 - 4196373 | 44165.0 |
| hypothetical protein | SAMN04488511_11479 | Not Available | Positive | 4196423 - 4196986 | 21503.3 |
| hypothetical protein | SAMN04488511_11480 | Not Available | Negative | 4197153 - 4197419 | 10003.2 |
| prtrc system thif family protein | SAMN04488511_11481 | Not Available | Negative | 4197577 - 4198368 | 28764.8 |
| prtrc system protein b | SAMN04488511_11482 | Not Available | Negative | 4198365 - 4199081 | 27288.1 |
| hypothetical protein | SAMN04488511_11483 | Not Available | Negative | 4199056 - 4200213 | 44607.7 |
| prtrc system protein c | SAMN04488511_11484 | Not Available | Negative | 4200233 - 4200451 | 8033.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
