Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mrna 3-end processing factor | SAMN04488511_101342 | Not Available | Positive | 421428 - 422453 | 38367.5 |
| dna ligase-1 | SAMN04488511_101343 | Not Available | Positive | 422460 - 424049 | 61021.1 |
| atp-dependent helicase lhr and lhr-like helicase | SAMN04488511_101344 | Not Available | Positive | 424264 - 426741 | 93557.5 |
| putative phosphoesterase | SAMN04488511_101345 | Not Available | Positive | 426813 - 427451 | 24205.2 |
| thioredoxin | SAMN04488511_101346 | Not Available | Negative | 427448 - 427744 | 10817.2 |
| hypothetical protein | SAMN04488511_101347 | Not Available | Negative | 427774 - 428328 | 21260.0 |
| hypothetical protein | SAMN04488511_101348 | Not Available | Negative | 428357 - 428971 | 23235.8 |
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | SAMN04488511_101349 | Not Available | Negative | 429053 - 430411 | 48865.5 |
| nicotinamide-nucleotide amidase | SAMN04488511_101350 | Not Available | Negative | 430468 - 431712 | 45668.4 |
| hypothetical protein | SAMN04488511_101351 | Not Available | Negative | 431717 - 434377 | 98557.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
