Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophanyl-trna synthetase | SAMN04488511_113160 | Not Available | Negative | 4115620 - 4116618 | 37506.8 |
| uncharacterized conserved protein yece, duf72 family | SAMN04488511_113161 | Not Available | Negative | 4116844 - 4117749 | 34374.2 |
| predicted nuclease, contains pin domain, potential toxin-antitoxin system component | SAMN04488511_113162 | Not Available | Negative | 4117763 - 4118116 | 13570.5 |
| uncharacterized conserved protein, duf433 family | SAMN04488511_113163 | Not Available | Negative | 4118109 - 4118345 | 8917.89 |
| arginine decarboxylase | SAMN04488511_113164 | Not Available | Negative | 4118438 - 4119826 | 53993.4 |
| hypothetical protein | SAMN04488511_113165 | Not Available | Positive | 4120523 - 4120830 | 11431.6 |
| integrase core domain-containing protein | SAMN04488511_1141 | Not Available | Positive | 4120831 - 4121133 | 11544.0 |
| iron complex outermembrane recepter protein | SAMN04488511_1142 | Not Available | Negative | 4121192 - 4123546 | 86123.6 |
| hypothetical protein | SAMN04488511_1143 | Not Available | Negative | 4123619 - 4123819 | 7266.26 |
| swi/snf related-matrix-associated actin-dependent regulator of chromatin subfamily c | SAMN04488511_1144 | Not Available | Positive | 4124169 - 4124348 | 6785.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
