Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488511_113129 | Not Available | Positive | 4082378 - 4083277 | 31796.3 |
| l,d-transpeptidase catalytic domain | SAMN04488511_113130 | Not Available | Positive | 4083689 - 4085224 | 57441.1 |
| l,d-transpeptidase catalytic domain | SAMN04488511_113131 | Not Available | Negative | 4085221 - 4086015 | 29096.7 |
| glycosyltransferase, gt2 family | SAMN04488511_113132 | Not Available | Positive | 4086253 - 4087074 | 30889.2 |
| predicted glycosyl transferase | SAMN04488511_113133 | Not Available | Negative | 4087071 - 4088117 | 38575.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488511_113134 | Not Available | Negative | 4088119 - 4089189 | 39688.8 |
| protein of unknown function | SAMN04488511_113135 | Not Available | Positive | 4089388 - 4089639 | 9180.42 |
| response regulator receiver domain-containing protein | SAMN04488511_113136 | Not Available | Positive | 4089789 - 4090178 | 14783.2 |
| dna alkylation repair enzyme | SAMN04488511_113137 | Not Available | Positive | 4090487 - 4091089 | 22916.8 |
| protein of unknown function | SAMN04488511_113138 | Not Available | Positive | 4091289 - 4091987 | 26466.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
