Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin) | SAMN04488511_113109 | Not Available | Positive | 4058818 - 4059453 | 23459.7 |
| cold-shock dna-binding protein family | SAMN04488511_113110 | Not Available | Positive | 4059655 - 4059852 | 7371.84 |
| predicted zn-dependent protease | SAMN04488511_113111 | Not Available | Negative | 4060196 - 4061515 | 50027.8 |
| peptidase family m23 | SAMN04488511_113112 | Not Available | Negative | 4061657 - 4062811 | 42526.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488511_113113 | Not Available | Negative | 4062920 - 4064380 | 55694.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488511_113114 | Not Available | Positive | 4064490 - 4065110 | 24454.8 |
| fecr family protein | SAMN04488511_113115 | Not Available | Positive | 4065170 - 4066318 | 41724.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_113116 | Not Available | Positive | 4066366 - 4069971 | 133577.0 |
| susd family protein | SAMN04488511_113117 | Not Available | Positive | 4069976 - 4071406 | 54144.9 |
| protein of unknown function | SAMN04488511_113118 | Not Available | Positive | 4071408 - 4073855 | 92992.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
