Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | SAMN04488511_11379 | Not Available | Positive | 4024033 - 4025214 | 44132.8 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN04488511_11380 | Not Available | Positive | 4025231 - 4026604 | 50843.6 |
| pas domain-containing protein | SAMN04488511_11381 | Not Available | Positive | 4026588 - 4027853 | 48197.2 |
| acyl-coa thioesterase-1 | SAMN04488511_11382 | Not Available | Negative | 4028089 - 4028676 | 21239.7 |
| short-chain dehydrogenase | SAMN04488511_11383 | Not Available | Negative | 4028677 - 4029657 | 34618.1 |
| lipase (class 3) | SAMN04488511_11384 | Not Available | Positive | 4030124 - 4031497 | 49691.8 |
| hypothetical protein | SAMN04488511_11385 | Not Available | Positive | 4031524 - 4033395 | 69482.1 |
| alpha-amylase | SAMN04488511_11386 | Not Available | Positive | 4033848 - 4035338 | 56363.2 |
| trna(arg) a34 adenosine deaminase tada | SAMN04488511_11387 | Not Available | Negative | 4035559 - 4036092 | 19483.3 |
| error-prone dna polymerase | SAMN04488511_11388 | Not Available | Negative | 4036103 - 4039330 | 121763.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
