Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase | SAMN04488511_11359 | Not Available | Positive | 3990690 - 3992690 | 76004.0 |
| beta-glucuronidase | SAMN04488511_11360 | Not Available | Positive | 3992696 - 3994486 | 68907.5 |
| glycosyl hydrolase family 88 | SAMN04488511_11361 | Not Available | Positive | 3994492 - 3995673 | 45552.2 |
| signal transduction histidine kinase | SAMN04488511_11362 | Not Available | Positive | 3996080 - 4000177 | 155730.0 |
| alginate lyase | SAMN04488511_11363 | Not Available | Positive | 4000243 - 4001355 | 42802.0 |
| beta-glucanase, gh16 family | SAMN04488511_11364 | Not Available | Positive | 4001366 - 4002229 | 33314.5 |
| rhamnogalacturonyl hydrolase yesr | SAMN04488511_11365 | Not Available | Positive | 4002241 - 4003383 | 43359.1 |
| protein of unknown function | SAMN04488511_11366 | Not Available | Positive | 4003390 - 4004328 | 35291.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_11367 | Not Available | Positive | 4004811 - 4007981 | 115594.0 |
| starch-binding associating with outer membrane | SAMN04488511_11368 | Not Available | Positive | 4007997 - 4009670 | 62829.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
