Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488511_101322 | Not Available | Positive | 399838 - 400527 | 26743.6 |
| predicted nuclease, contains pin domain, potential toxin-antitoxin system component | SAMN04488511_101323 | Not Available | Negative | 400518 - 400844 | 12611.6 |
| uncharacterized conserved protein, duf433 family | SAMN04488511_101324 | Not Available | Negative | 400828 - 401070 | 8834.67 |
| hypothetical protein | SAMN04488511_101325 | Not Available | Negative | 401306 - 402496 | 43567.4 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN04488511_101326 | Not Available | Positive | 402551 - 403690 | 42410.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN04488511_101327 | Not Available | Positive | 403760 - 404260 | 17352.0 |
| putative transcriptional regulator | SAMN04488511_101328 | Not Available | Negative | 404329 - 404904 | 21753.8 |
| pyridoxamine 5'-phosphate oxidase | SAMN04488511_101329 | Not Available | Positive | 404939 - 405589 | 24843.5 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN04488511_101330 | Not Available | Positive | 405679 - 406572 | 32146.1 |
| holliday junction dna helicase subunit ruvb | SAMN04488511_101331 | Not Available | Positive | 406604 - 407626 | 37541.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
