Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide pyrophosphorylase | SAMN04488511_112116 | Not Available | Negative | 3861812 - 3862654 | 30432.9 |
| protein of unknown function | SAMN04488511_112117 | Not Available | Negative | 3862784 - 3863182 | 15175.3 |
| phosphoglycerate mutase | SAMN04488511_112118 | Not Available | Positive | 3863355 - 3864878 | 55727.9 |
| hypothetical protein | SAMN04488511_112119 | Not Available | Positive | 3864878 - 3865408 | 20206.5 |
| outer membrane lipoprotein | SAMN04488511_112120 | Not Available | Negative | 3865464 - 3866084 | 23808.6 |
| atp-dependent lon protease | SAMN04488511_112121 | Not Available | Positive | 3866380 - 3868875 | 93047.0 |
| hypothetical protein | SAMN04488511_112122 | Not Available | Positive | 3868959 - 3869909 | 35591.1 |
| mac/perforin domain-containing protein | SAMN04488511_112123 | Not Available | Negative | 3870006 - 3871040 | 38151.1 |
| ribosome-associated protein | SAMN04488511_112124 | Not Available | Negative | 3871169 - 3871576 | 15475.1 |
| cytidylate kinase | SAMN04488511_112125 | Not Available | Positive | 3871651 - 3872331 | 25738.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
