Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial translation initiation factor 3 (bif-3) | SAMN04488511_101312 | Not Available | Negative | 383871 - 384440 | 21437.2 |
| ser-trna(thr) hydrolase /threonyl-trna synthetase | SAMN04488511_101313 | Not Available | Negative | 384458 - 386383 | 73031.2 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488511_101314 | Not Available | Negative | 386502 - 387593 | 41078.4 |
| glpgli family protein | SAMN04488511_101315 | Not Available | Negative | 387728 - 388627 | 32611.9 |
| l-lactate dehydrogenase complex protein llde | SAMN04488511_101316 | Not Available | Negative | 388983 - 389720 | 27380.7 |
| mfs transporter, umf1 family | SAMN04488511_101317 | Not Available | Negative | 389745 - 391052 | 48278.1 |
| atp-dependent dna helicase recq | SAMN04488511_101318 | Not Available | Negative | 391191 - 393089 | 72375.4 |
| imidazolonepropionase | SAMN04488511_101319 | Not Available | Positive | 393454 - 396681 | 119397.0 |
| hypothetical protein | SAMN04488511_101320 | Not Available | Positive | 396826 - 397089 | 9960.95 |
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN04488511_101321 | Not Available | Negative | 397394 - 399604 | 84447.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
