Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valyl-trna synthetase | SAMN04488511_11276 | Not Available | Negative | 3817188 - 3819866 | 102952.0 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN04488511_11277 | Not Available | Negative | 3820117 - 3820752 | 23966.8 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN04488511_11278 | Not Available | Negative | 3820792 - 3821430 | 24220.1 |
| cd2+/zn2+-exporting atpase | SAMN04488511_11279 | Not Available | Negative | 3821599 - 3823590 | 72042.7 |
| putative endopeptidase | SAMN04488511_11280 | Not Available | Positive | 3823951 - 3825984 | 76055.6 |
| protein of unknown function duf2625 | SAMN04488511_11281 | Not Available | Positive | 3826299 - 3827099 | 30246.1 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN04488511_11282 | Not Available | Negative | 3827163 - 3827501 | 13046.7 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN04488511_11283 | Not Available | Positive | 3827732 - 3828397 | 24547.3 |
| predicted oxidoreductase | SAMN04488511_11284 | Not Available | Positive | 3828727 - 3829674 | 35490.8 |
| predicted purr-regulated permease perm | SAMN04488511_11285 | Not Available | Positive | 3829705 - 3830862 | 43160.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
